The detailed information of tRNA gene sequence


Sequence ID>WENV170644396
Genome IDJMBW01010782
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 189
End posion on genome 265
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acagtagggg
tRNA gene sequence 
GGGCCTTTAGCTCAGTCGGTTAGAGCGCCCGGCTCATAACCGGTAGGTCCGGGGGGGTTC
GAGTCCCTGAAGGCCCAttg
Downstream region at tRNA end position 
tgcctaactc
Secondary structure (Cloverleaf model)
>WENV170644396	Met	CAT
                   g      Attg tgcctaactc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A        + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTCCGG
                    C   T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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