The detailed information of tRNA gene sequence


Sequence ID>WENV170644398
Genome IDJMBW01010782
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 657
End posion on genome 729
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcaacgaagg
tRNA gene sequence 
GGGGGTGTAGTTCAGCGGTAGAACGTCGGTCTCCAAAACCGAATGCCGTGGGTTCGAGTC
CTGCCACCCCCCCtg
Downstream region at tRNA end position 
ccatttagag
Secondary structure (Cloverleaf model)
>WENV170644398	Trp	CCA
                   g      CCtg ccatttagag
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C G T C C     A
        G A        A      | + + | |     G
      C     C T T G       G T G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        G     ATGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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