The detailed information of tRNA gene sequence


Sequence ID>WENV170644413
Genome IDJMBW01012575
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 191
End posion on genome 104
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttgatggga
tRNA gene sequence 
GGGGGGGTGTCCGAGCGGTTTATGGAGCCGGTCTTGAAAACCGGTGTCTCAGAAATGGGC
CGTGGGTTCGAATCCCACCCCTCCGCCAt
Downstream region at tRNA end position 
gattcgcaaa
Secondary structure (Cloverleaf model)
>WENV170644413	Ser	TGA
                   a      CCAt gattcgcaaa
                     G   G
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G       + | | |                 T T
    T       T G G A
      T T A        G     TGTCTCAGAAATGGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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