The detailed information of tRNA gene sequence


Sequence ID>WENV170644414
Genome IDJMBW01012951
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 44
End posion on genome 118
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
acaaaatggg
tRNA gene sequence 
GGGGCGTTAGCTCAGTTGGCTAGAGCGTTAGACTGGCAGTCTAAAGGTCATGGGTTCGAT
TCCCATACGCTCCACtt
Downstream region at tRNA end position 
ctaaatattt
Secondary structure (Cloverleaf model)
>WENV170644414	Ala	GGC
                   g      ACtt ctaaatattt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     T - A          T T
                    T     T A C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    T - A
                    T - A
                    A - T
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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