The detailed information of tRNA gene sequence


Sequence ID>WENV170644457
Genome IDJMBW01017248
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 227
End posion on genome 153
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaggcttcat
tRNA gene sequence 
GGGCCTATAGCTCAGCGGTAGAGCCACCGGCTCATAACCGGTTGGTCCCTGGTTCGATCC
CAGGTGGGCCCACCA
Downstream region at tRNA end position 
ttaaagggcg
Secondary structure (Cloverleaf model)
>WENV170644457	Met	CAT
                   t      ACCA ttaaagggcg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          C T
                    T     G G A C C     A
        G A        A      | | | | |     G
      C     C T C G       C C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        C     TGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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