The detailed information of tRNA gene sequence


Sequence ID>WENV170644459
Genome IDJMBW01017268
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 238
End posion on genome 313
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttgctttgat
tRNA gene sequence 
ACGCCTGTAGCTCAACTGGCAGAGCGGCGGTCTCCAAAACCGCAGGCTGGGGGTTCGATT
CCCTCCGGGCGTGCCA
Downstream region at tRNA end position 
attttgtata
Secondary structure (Cloverleaf model)
>WENV170644459	Trp	CCA
                   t      GCCA attttgtata
                     A - T
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T T
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGCT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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