The detailed information of tRNA gene sequence


Sequence ID>WENV170644461
Genome IDJMBW01017406
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 180
End posion on genome 106
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tcgttttggg
tRNA gene sequence 
GGGGAATTAGCTCAGTTGGCTAGAGCGCTAGATTTGCATTCTAGAGGTCAAGGGTTCGAC
TCCCTTATTCTCCACac
Downstream region at tRNA end position 
tctgtctttt
Secondary structure (Cloverleaf model)
>WENV170644461	Ala	TGC
                   g      ACac tctgtctttt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T C
                    T     T T C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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