The detailed information of tRNA gene sequence


Sequence ID>WENV170644475
Genome IDJMBW01018222
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 206
End posion on genome 277
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cctgcagggg
tRNA gene sequence 
GGGCCTGTAGCTCAATGGCGGAGCAGGCGGCTCATAACCGCTTGGTTGATGGTTCGAATC
CATCCGGGCCCAttt
Downstream region at tRNA end position 
tcttttattt
Secondary structure (Cloverleaf model)
>WENV170644475	Met	CAT
                   g      Attt tcttttattt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C T A C C     A
        A A        A      | | | | |     G
      T     C T C G       G A T G G     C
      G     | | | |                 T T
      G     G A G C
        C G        A     TGGTT
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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