The detailed information of tRNA gene sequence


Sequence ID>WENV170644486
Genome IDJMBW01018343
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 506
End posion on genome 599
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggtttaaagg
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCATAACGGGGCGGTCTTGAAAACCGTTGGGGGGGTCTTGCG
GCCCACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
aaaaaatatg
Secondary structure (Cloverleaf model)
>WENV170644486	Ser	TGA
                   g      GCCA aaaaaatatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TGGGGGGGTCTTGCGGCCCAC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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