The detailed information of tRNA gene sequence


Sequence ID>WENV170644487
Genome IDJMBW01019023
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 34
End posion on genome 110
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tccaggtcgg
tRNA gene sequence 
GGGGGCATGGCGCAGGTTGGTAGCGCGCTTGGTTCGGGACTAAGAGGTCGGCGGTTCAAG
TCCGCCTGCCCCGACCA
Downstream region at tRNA end position 
gttaaacaag
Secondary structure (Cloverleaf model)
>WENV170644487	Pro	CGG
                   g      ACCA gttaaacaag
                     G   G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T G
                    T     C C G C C     A
      G G A        G      | | | | |     A
    T       C G C G       G G C G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G + T
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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