The detailed information of tRNA gene sequence


Sequence ID>WENV170644493
Genome IDJMBW01019860
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 269
End posion on genome 362
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcggattaat
tRNA gene sequence 
GGAGAGATGACCGAGTTGGTTGAAGGTGCACGCCTGGAAAGCGTGTGTAGGGGGGGAAAC
TCTACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
taaataaagg
Secondary structure (Cloverleaf model)
>WENV170644493	Ser	GGA
                   t      GCCA taaataaagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C C A       G A G G G     C
  G           | | |                 T T
  T         A G G T
    T G A          G     TGTAGGGGGGGAAACTCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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