The detailed information of tRNA gene sequence


Sequence ID>WENV170644497
Genome IDJMBW01020257
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 526
End posion on genome 601
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ctgacacttt
tRNA gene sequence 
GGGCGCTTAGCTCAGTTGGTTAGAGCGCACGGTTCACATCCGTGAGGTTCGGAGGTTCGA
GTCCTCTAGCGCCCACac
Downstream region at tRNA end position 
ttaggccgaa
Secondary structure (Cloverleaf model)
>WENV170644497	Val	CAC
                   t      ACac ttaggccgaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          T G
                    T     T C T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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