The detailed information of tRNA gene sequence


Sequence ID>WENV170644502
Genome IDJMBW01021516
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 190
End posion on genome 282
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tatactatat
tRNA gene sequence 
GGAGGATTACCCAAGTCCGGCTGAAGGGATCGGTCTTGAAAACCGACAGGTGGTTAACGC
CACGCGGGGGGGGTTCAAATCCCTCATCCTCCTtat
Downstream region at tRNA end position 
accattatcg
Secondary structure (Cloverleaf model)
>WENV170644502	Ser	TGA
                   t      Ttat accattatcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C T C C C     A
    C T G A        A      | + | | |     A
  C         A C C C       G G G G G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGGTGGTTAACGCCACGCGGG
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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