The detailed information of tRNA gene sequence


Sequence ID>WENV170644519
Genome IDJMBW01023742
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 542
End posion on genome 449
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatatatcgt
tRNA gene sequence 
GGAGAAGTACTCAAGTGGCTGAAGAGGCTCCCCTGCTAAGGGAGTAGGTCCTTCATGGGG
GGGCGCGAGGGTTCAAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
tggggggggc
Secondary structure (Cloverleaf model)
>WENV170644519	Ser	GCT
                   t      GCCA tggggggggc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCCTTCATGGGGGGGCGC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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