The detailed information of tRNA gene sequence


Sequence ID>WENV170644524
Genome IDJMBW01023991
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 187
End posion on genome 262
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
attgttttgg
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGGAGTTCGACT
CTCCTCATCTCCACCA
Downstream region at tRNA end position 
aaagtagtat
Secondary structure (Cloverleaf model)
>WENV170644524	Ala	TGC
                   g      ACCA aaagtagtat
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     G - C          T C
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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