The detailed information of tRNA gene sequence


Sequence ID>WENV170644531
Genome IDJMBW01025502
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 330
End posion on genome 256
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaatagtgc
tRNA gene sequence 
GGGGGGGTGGAGCAGAGGTAGCTCGTTGGGCTCATAACCCAAAGGCCGGAGGTTCGAATC
CTTCCCCCGCTACAA
Downstream region at tRNA end position 
cttaaaaatt
Secondary structure (Cloverleaf model)
>WENV170644531	Met	CAT
                   c      ACAA cttaaaaatt
                     G + T
                     G - C
                     G   G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
        G A        G      | + | | |     G
      A     C G A G       G G A G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGCC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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