The detailed information of tRNA gene sequence


Sequence ID>WENV170644541
Genome IDJMBW01027172
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 329
End posion on genome 406
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttaaaattgg
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGGAGAGCACCTGCCTTGCAAGCAGGGGGGGTCAGGAGTTCGA
ATCTCCTCATCTCCACCA
Downstream region at tRNA end position 
ctttaagcaa
Secondary structure (Cloverleaf model)
>WENV170644541	Ala	TGC
                   g      ACCA ctttaagcaa
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     G - C          T A
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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