The detailed information of tRNA gene sequence


Sequence ID>WENV170644567
Genome IDJMBW01031802
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 229
End posion on genome 304
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
caaaacattc
tRNA gene sequence 
GGGCCATTAGCTCAGCTGGTAGAGCAGCTGACTCTTAATCAGAAGGTCACAGGTTCGATC
CCTGTATGGCCCACCA
Downstream region at tRNA end position 
tagaaaacag
Secondary structure (Cloverleaf model)
>WENV170644567	Lys	CTT
                   c      ACCA tagaaaacag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          C T
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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