The detailed information of tRNA gene sequence


Sequence ID>WENV170644570
Genome IDJMBW01032111
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 260
End posion on genome 336
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gataaaatgt
tRNA gene sequence 
CGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCTGGTTCAAA
TCCGGCTCCCGCAACCA
Downstream region at tRNA end position 
taaattattt
Secondary structure (Cloverleaf model)
>WENV170644570	Met	CAT
                   t      ACCA taaattattt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G G C C     A
      T G A        G      | | + | |     A
    C       C G A G       G C T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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