The detailed information of tRNA gene sequence


Sequence ID>WENV170644575
Genome IDJMBW01032821
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 423
End posion on genome 347
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaatatat
tRNA gene sequence 
CGCGGGATGGAGCAGTATGGTAGCTCGTCGGGCTCATAACCCGGAGGTCATAGGTTCAAA
TCCTATTCCCGCAACCA
Downstream region at tRNA end position 
taattttctt
Secondary structure (Cloverleaf model)
>WENV170644575	Met	CAT
                   t      ACCA taattttctt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     T A T C C     A
      T G A        G      | | | | |     A
    A       C G A G       A T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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