The detailed information of tRNA gene sequence


Sequence ID>WENV170644624
Genome IDJMBW01044320
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 320
End posion on genome 395
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaagtttcgt
tRNA gene sequence 
CGCGGGGTGGAGCAGCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCTGGTTCAAAT
CCAGCCCCCCCCGCCA
Downstream region at tRNA end position 
ccatttttnn
Secondary structure (Cloverleaf model)
>WENV170644624	Met	CAT
                   t      GCCA ccatttttnn
                     C   C
                     G - C
                     C   C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      C G A        G      | | | | |     A
    T       C G A G       G C T G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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