The detailed information of tRNA gene sequence


Sequence ID>WENV170644633
Genome IDJMBW01045950
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 267
End posion on genome 177
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agtataaaat
tRNA gene sequence 
GGAGAGGTACCGAAGCGGTCATAACGGGGCGGTCTTGAAAACCGTTGGGGCCTTACGGCC
CACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gttttgtgga
Secondary structure (Cloverleaf model)
>WENV170644633	Ser	TGA
                   t      GCCA gttttgtgga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G C G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TGGGGCCTTACGGCCCAC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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