The detailed information of tRNA gene sequence


Sequence ID>WENV170644642
Genome IDJMBW01047554
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 42
End posion on genome 135
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatatatcgt
tRNA gene sequence 
GGAGAAGTACTCAAGTGGCTGAAGAGGCTCCCCTGCTAAGGGAGTAGGTCCTTCATGGGG
GGGCGCGAGGGTTCAAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
tttggggggg
Secondary structure (Cloverleaf model)
>WENV170644642	Ser	GCT
                   t      GCCA tttggggggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCCTTCATGGGGGGGCGC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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