The detailed information of tRNA gene sequence


Sequence ID>WENV170644643
Genome IDJMBW01047554
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 144
End posion on genome 223
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
catttggggg
tRNA gene sequence 
GGGCCTTTAGCTCAGTCGGTTAGAGCGCCCGGCTCATAACCGGTAGGTCCGGGGGGGTTC
GAGTCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
aaatttcaac
Secondary structure (Cloverleaf model)
>WENV170644643	Met	CAT
                   g      ACCA aaatttcaac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A        + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTCCGG
                    C   T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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