The detailed information of tRNA gene sequence


Sequence ID>WENV170644645
Genome IDJMBW01047862
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 284
End posion on genome 360
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agcatgtcgt
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGTCAGAGCATACGGTTCATACCCGTAGAGTCGCTGGTTCAAA
TCCAGCCGCCGCTACCA
Downstream region at tRNA end position 
tgaaactacg
Secondary structure (Cloverleaf model)
>WENV170644645	Met	CAT
                   t      ACCA tgaaactacg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GAGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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