The detailed information of tRNA gene sequence


Sequence ID>WENV170644667
Genome IDJMBW01054102
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 236
End posion on genome 161
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agctttgcgc
tRNA gene sequence 
AGGGGAGTAGCTCAATTGGTAGAGCATCGGTCTCCAAAACCGAGGGCTGCGGGTTCGAGT
CCTGTCTCCCCTGCCA
Downstream region at tRNA end position 
ttatattgga
Secondary structure (Cloverleaf model)
>WENV170644667	Trp	CCA
                   c      GCCA ttatattgga
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G T C C     A
      T A A        A      + | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGCT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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