The detailed information of tRNA gene sequence


Sequence ID>WENV170644688
Genome IDJMBW01058520
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 166
End posion on genome 241
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tcagtgaggG
tRNA gene sequence 
GGGGTCGTAGGGTAGCCTGGACATCCTATGGCGTTCGGGACGCTGTAACCTGAGTTCAAA
TCTCAGCGACCCATTta
Downstream region at tRNA end position 
ttattaaagt
Secondary structure (Cloverleaf model)
>WENV170644688	Pro	CGG
                   G      TTta ttattaaagt
                     G   A
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     G A C T C     A
    C C G A        A      | | | | |     A
  T         T G G G       C T G A G     C
  G           | | +                 T T
  G         T C C T
    A C A          A     TAAC
                    T + G
                    G + T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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