The detailed information of tRNA gene sequence


Sequence ID>WENV170644695
Genome IDJMBW01059882
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 193
End posion on genome 101
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caatactttt
tRNA gene sequence 
GGAGAGGTGGCTGAGTCTGGCCGAAGGCGCACGACTGGAAATCGTGTAAACGTGATGAGC
GTTTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
atataatttt
Secondary structure (Cloverleaf model)
>WENV170644695	Ser	GGA
                   t      GCCA atataatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
    C T G A        G      | | | | |     G
  T         G T C G       G A G G G     C
  G           + | |                 T T
  G         A G G C
    C C G A        G     TAAACGTGATGAGCGTTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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