The detailed information of tRNA gene sequence


Sequence ID>WENV170644720
Genome IDJMBW01073020
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 129
End posion on genome 205
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
caccattact
tRNA gene sequence 
GGTTCCTTAGCTCAGTTGGTTAGAGTGCTGCCTTGACATGGCAGAGGTCGTTGGTTCGAT
TCCAACAGGAACCACCA
Downstream region at tRNA end position 
tgatataaca
Secondary structure (Cloverleaf model)
>WENV170644720	Val	GAC
                   t      ACCA tgatataaca
                     G - C
                     G - C
                     T - A
                     T - A
                     C - G
                     C - G
                     T - A          T T
                    T     C A A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T T G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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