The detailed information of tRNA gene sequence


Sequence ID>WENV170644753
Genome IDJMBW01081608
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 105
End posion on genome 180
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
acaataatat
tRNA gene sequence 
GGGCGGTTAGCTCAGTCGGCTAGAGCGCTTGCTTGACATGCAAGAGGTCACAGGTTCAAG
TCCTGTACCGCCACCAt
Downstream region at tRNA end position 
cgaagcatgg
Secondary structure (Cloverleaf model)
>WENV170644753	Val	GAC
                   t      CCAt cgaagcatgg
                     G   A
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T G
                    T     T G T C C     A
      T G A        A      | | | | |     A
    C       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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