The detailed information of tRNA gene sequence


Sequence ID>WENV170644758
Genome IDJMBW01082988
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 223
End posion on genome 148
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taatattatt
tRNA gene sequence 
CGCGGGGTGGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGGAGGTCGTAGGTTCAAAT
CCTACCCCCCCCGCAA
Downstream region at tRNA end position 
ttaacctgaa
Secondary structure (Cloverleaf model)
>WENV170644758	Met	CAT
                   t      GCAA ttaacctgaa
                     C   C
                     G - C
                     C   C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     A
    T       C G A G       G T A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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