The detailed information of tRNA gene sequence


Sequence ID>WENV170644781
Genome IDJMBW01092516
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 85
End posion on genome 178
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttaagatcaa
tRNA gene sequence 
GGAGAGATGGCCGAGCTGGCTGAAGGCGCTCGCCTGCTAAGCGAGTAAGCGGTGAATAGC
TGCTTCGAGGGTTCAAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttcttaccag
Secondary structure (Cloverleaf model)
>WENV170644781	Ser	GCT
                   a      GCCA ttcttaccag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     A
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TAAGCGGTGAATAGCTGCTTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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