The detailed information of tRNA gene sequence


Sequence ID>WENV170644797
Genome IDJMBW01097008
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 157
End posion on genome 83
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tcttatcttT
tRNA gene sequence 
GGGCTCGTAGATCAGGGGTTAGATCGTTTCGTTCGCAACGAAAAGGCCGCGGGTTCAAAT
CCCGCCGAGTCCATgt
Downstream region at tRNA end position 
tctgtttctc
Secondary structure (Cloverleaf model)
>WENV170644797	Ala	CGC
                   T      ATgt tctgtttctc
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G C C C     A
      G G A        A      | | | | |     A
    G       C T A G       G C G G G     C
    G       | | | |                 T T
    T       G A T C
      T A          G     AGGCC
                    T - A
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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