The detailed information of tRNA gene sequence


Sequence ID>WENV170644801
Genome IDJMBW01098086
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 102
End posion on genome 182
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
attgcgtcgg
tRNA gene sequence 
GGGGGCGTGGCGCAGCTTGGCTAGCGCGCTACCTTGGGGGGGTGGTAGAGGTCGCAAGTT
CAAATCTTGTCGCCCCGACCA
Downstream region at tRNA end position 
ctttttttta
Secondary structure (Cloverleaf model)
>WENV170644801	Pro	GGG
                   g      ACCA ctttttttta
                     G   G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G T T C     A
    T C G A        G      + | | | |     A
  T         C G C G       G C A A G     C
  G         | | | |                 T T
  G         G C G C
    C T A          G     TAGAGGTC
                    C - G
                    T + G
                    A - T
                    C - G
                    C - G
                  T       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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