The detailed information of tRNA gene sequence


Sequence ID>WENV170644806
Genome IDJMBW01104434
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 129
End posion on genome 54
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tctttattat
tRNA gene sequence 
GGGGATGTAGCTCAACTGGGAGAGCGCCGCCCTTGCAAGGCGGAGGTCAGCGGTTCGATC
CCGCTCATCTCCACCA
Downstream region at tRNA end position 
tggccgacta
Secondary structure (Cloverleaf model)
>WENV170644806	Ala	TGC
                   t      ACCA tggccgacta
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          C T
                    T     T C G C C     A
      C A A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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