The detailed information of tRNA gene sequence


Sequence ID>WENV170644807
Genome IDJMBW01104813
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 63
End posion on genome 140
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gaaagtaccT
tRNA gene sequence 
AGGTCAGTAGCTCAATTGGCAGAGCACCGCTCTCCAAAAGCGGGGGGGGCTGAGGGTTCG
AGTCCTTCCTGACCTGTtg
Downstream region at tRNA end position 
atgttgattt
Secondary structure (Cloverleaf model)
>WENV170644807	Trp	CCA
                   T      GTtg atgttgattt
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C          T G
                    T     C T T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGGGGCT
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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