The detailed information of tRNA gene sequence


Sequence ID>WENV170644824
Genome IDJMBW01114524
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 228
End posion on genome 153
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
nnnnnnnnaa
tRNA gene sequence 
GGGCGAATAGCTCAGCTGGGAGAGTGCCTGGATCACACCCAGGAGGCCACAGGTTCGAGC
CCTGTTTCGCCCACCA
Downstream region at tRNA end position 
atagtgcgga
Secondary structure (Cloverleaf model)
>WENV170644824	Val	CAC
                   a      ACCA atagtgcgga
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T          C G
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | +                 T T
    G       G A G T
      G A          G     AGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  A       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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