The detailed information of tRNA gene sequence


Sequence ID>WENV170644852
Genome IDJMBW01133352
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 163
End posion on genome 72
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgttaaatgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTAGGTCGAAGGCGGTCGCCTGCTAAGCGATTGTACAGCCTATAAC
TGTACCCGGTTCGAATCCCGGCCTCTCCGCCA
Downstream region at tRNA end position 
taataattac
Secondary structure (Cloverleaf model)
>WENV170644852	Ser	GCT
                   c      GCCA taataattac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G G C C C     A
    A T G A        G      | |   | |     G
  G         G C C G       C C C G G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TGTACAGCCTATAACTGTA
                    G + T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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