The detailed information of tRNA gene sequence


Sequence ID>WENV170644855
Genome IDJMBW01137908
Search identical group
Phylum/Class[JMBW] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 97
End posion on genome 175
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tgaatgtggg
tRNA gene sequence 
GGGGGTATAGCTCAGCTGGGAGAGCACCTGCCTTGCAAGCAGGGGGGGGTCAGGAGTTCG
AATCTCCTTATCTCCACCA
Downstream region at tRNA end position 
cactccgata
Secondary structure (Cloverleaf model)
>WENV170644855	Ala	TGC
                   g      ACCA cactccgata
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     A - T          T A
                    T     T C C T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGGGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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