The detailed information of tRNA gene sequence


Sequence ID>WENV170644889
Genome IDJMBX01000036
Search identical group
Phylum/Class[JMBX] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 11520
End posion on genome 11594
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ctcgcgccgg
tRNA gene sequence 
GGGGGTGTGGCGCAGACGGCTAGCGCGCTGCGTTTGGGACGCAGAGGTCGTCGGTTCAAG
TCCGACCACCCCGACtt
Downstream region at tRNA end position 
tttgtttaaa
Secondary structure (Cloverleaf model)
>WENV170644889	Pro	TGG
                   g      ACtt tttgtttaaa
                     G   G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C A G C C     A
      A G A        G      | | | | |     A
    C       C G C G       G T C G G     C
    G       | | | |                 T T
    G       G C G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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