The detailed information of tRNA gene sequence


Sequence ID>WENV170644975
Genome IDJMBX01000538
Search identical group
Phylum/Class[JMBX] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 3524
End posion on genome 3450
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gtgtgttgac
tRNA gene sequence 
GGGCGCTTAGCTCAGTGGGAGAGCGTCTGCCTTACAAGCAGAAGGTCGTAGGTTCAAGTC
CTGCAGCGCCCACCA
Downstream region at tRNA end position 
tcctcttttt
Secondary structure (Cloverleaf model)
>WENV170644975	Val	TAC
                   c      ACCA tcctcttttt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          T G
                    T     C G T C C     A
        G A        A      | + | | |     A
      T     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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