The detailed information of tRNA gene sequence


Sequence ID>WENV170645084
Genome IDJMBX01002872
Search identical group
Phylum/Class[JMBX] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 1539
End posion on genome 1464
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ttttattatt
tRNA gene sequence 
GGGCATTTAACTCAGTTGGTTCAGAGTGTCACCTTGACAGGGTGGAAGTCACTGGTTCGA
GTCCAGTAATGCCCACat
Downstream region at tRNA end position 
ttttcacctt
Secondary structure (Cloverleaf model)
>WENV170645084	Val	GAC
                   t      ACat ttttcacctt
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     T - A
                     T - A          T G
                    T     T G A C C     A
    T T G A        A      | | | | |     G
  G         C T C A       A C T G G     C
  G         | | | |                 T T
  T         G A G T
    T C A          G     AAGTC
                    T + G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       G
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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