The detailed information of tRNA gene sequence


Sequence ID>WENV170645124
Genome IDJMBX01005965
Search identical group
Phylum/Class[JMBX] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 172
End posion on genome 249
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttttaagcgg
tRNA gene sequence 
GGGGGTGTAGCTCAGCTGGGAGAGCACCTGCCTTGCAAGCAGGGGGGGTCAGCGGTTCGA
ATCCGCTCATCTCCACCA
Downstream region at tRNA end position 
tggaggcagt
Secondary structure (Cloverleaf model)
>WENV170645124	Ala	TGC
                   g      ACCA tggaggcagt
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     G - C          T A
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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