The detailed information of tRNA gene sequence


Sequence ID>WENV170645245
Genome IDJMBX01025360
Search identical group
Phylum/Class[JMBX] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 188
End posion on genome 110
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agctttgcgc
tRNA gene sequence 
AGGGGAGTAGCTCAACTGGTAGAGCAACGGTCTCCAAAACCGTAGGCTGCGGGTTCGAGT
CCTGTCTCCCCCCCTGCCA
Downstream region at tRNA end position 
ttatattgga
Secondary structure (Cloverleaf model)
>WENV170645245	Trp	CCA
                   c      GCCA ttatattgga
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A   C
                     G - C          T C
                    T     C T C T G     C
      C A A        A      | +     |     T
    T       C T C G       G G T T C     G
    G       | | | |                 G A
    G       G A G C
      T A          A     AGGCTGCG
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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