The detailed information of tRNA gene sequence


Sequence ID>WENV170645272
Genome IDJMBY01000083
Search identical group
Phylum/Class[JMBY] hydrothermal vent metagenome; Tahi Moana Hydrothermal plume at Lau Basin, Pacific Ocean
Species
Start position on genome 36854
End posion on genome 36778
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atccttttaa
tRNA gene sequence 
GGGCCTATAGCTCAGCTGGTTAGAGCAATCGACTCATAATCGATTGGTCCTTGGTTCAAG
TCCAAGTAGGCCCACCA
Downstream region at tRNA end position 
cacaatttta
Secondary structure (Cloverleaf model)
>WENV170645272	Met	CAT
                   a      ACCA cacaatttta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     G A A C C     A
      C G A        A      | | | | |     A
    T       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    A - T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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