The detailed information of tRNA gene sequence


Sequence ID>WENV170645279
Genome IDJMBY01000115
Search identical group
Phylum/Class[JMBY] hydrothermal vent metagenome; Tahi Moana Hydrothermal plume at Lau Basin, Pacific Ocean
Species
Start position on genome 1548
End posion on genome 1474
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aaaggttttt
tRNA gene sequence 
GTCCGGTTCGTCTATCGGTTAGGACTCCAGGTTTTCATCCTGGCAAGAGGGGTTCGATTC
CCCTACCGGATGCCA
Downstream region at tRNA end position 
ctttcagcca
Secondary structure (Cloverleaf model)
>WENV170645279	Glu	TTC
                   t      GCCA ctttcagcca
                     G + T
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A          T T
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          T     CAAG
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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