The detailed information of tRNA gene sequence


Sequence ID>WENV170645505
Genome IDJNSK01000025
Search identical group
Phylum/Class[JNSK] freshwater metagenome; water column of the freshwater reservoir Embalse de Amadorio in Spain
Species
Start position on genome 36564
End posion on genome 36488
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agccccatac
tRNA gene sequence 
GGGACGGTAGCTCAGTTGGTTAGAGCCCCGAACTCATAATTCGGTCGTCGTCGGTTCAAG
TCCGACCCGTCCCACCA
Downstream region at tRNA end position 
tcgcttactt
Secondary structure (Cloverleaf model)
>WENV170645505	Met	CAT
                   c      ACCA tcgcttactt
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     G - C          T G
                    T     C A G C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        C     TCGTC
                    C - G
                    C - G
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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