The detailed information of tRNA gene sequence


Sequence ID>WENV170645555
Genome IDJNSK01000131
Search identical group
Phylum/Class[JNSK] freshwater metagenome; water column of the freshwater reservoir Embalse de Amadorio in Spain
Species
Start position on genome 13409
End posion on genome 13494
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cctctcccac
tRNA gene sequence 
GGAGGGCTCGCATAGCGGCCGAGTGCACCGGTCTTGAAAACCGGCAGGTGAAAGCCTCGT
GGGTTCAAATCCCACGCCCTCCGCCA
Downstream region at tRNA end position 
gttnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170645555	Ser	TGA
                   c      GCCA gttnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     C A C C C     A
      C G A        C      | | | | |     A
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    C       G T G C
      C G A        A     CAGGTGAAAGCCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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