The detailed information of tRNA gene sequence


Sequence ID>WENV170645562
Genome IDJNSK01000156
Search identical group
Phylum/Class[JNSK] freshwater metagenome; water column of the freshwater reservoir Embalse de Amadorio in Spain
Species
Start position on genome 4754
End posion on genome 4843
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctcaccactt
tRNA gene sequence 
GGAGACGTCGCATAGCCCGGTCGAGTGCGCCTCACTGCTAACGAGGTAAGGGGTAAAACC
CTTCAAGAGTTCAAATCTCTTCGTCTCCGCtc
Downstream region at tRNA end position 
tttttatcta
Secondary structure (Cloverleaf model)
>WENV170645562	Ser	GCT
                   t      GCtc tttttatcta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T T C T C     A
    C C G A        C      | | | | |     A
  C         T A C G       A A G A G     C
  G         + | | |                 T T
  G         G T G C
    T C G A        G     TAAGGGGTAAAACCCTTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A   C
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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