The detailed information of tRNA gene sequence


Sequence ID>WENV170645589
Genome IDJNSL01000010
Search identical group
Phylum/Class[JNSL] freshwater metagenome; water column of the freshwater reservoir Embalse de Amadorio in Spain
Species
Start position on genome 1482
End posion on genome 1576
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gagagttctc
tRNA gene sequence 
GGAGACGTCGCATAGCCCGGTCGAGTGCGCCTCACTGCTAATGAGGTAGGGGTTTTAAAA
GCCCCTCGGAGGTTCAAATCCTCTCGTCTCCGCCA
Downstream region at tRNA end position 
gtaaaccatt
Secondary structure (Cloverleaf model)
>WENV170645589	Ser	GCT
                   c      GCCA gtaaaccatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C T C C     A
    C C G A        C      + | | | |     A
  C         T A C G       G G A G G     C
  G         + | | |                 T T
  G         G T G C
    T C G A        G     TAGGGGTTTTAAAAGCCCCTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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